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Cluster: HRGMv2_2765_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2765_7 HRGMv2_2765_7_15 19772 20533 + 9.B.18.1.3
CAZyme HRGMv2_2765_7 HRGMv2_2765_7_16 20541 21647 + GT4
pfam HRGMv2_2765_7 HRGMv2_2765_7_17 21647 22558 + ATPgrasp_TupA
pfam HRGMv2_2765_7 HRGMv2_2765_7_18 22574 23608 + EpsG
CAZyme HRGMv2_2765_7 HRGMv2_2765_7_19 23620 24597 + GT2
NULL(UNKNOWN) HRGMv2_2765_7 HRGMv2_2765_7_20 24607 26034 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2765_7 HRGMv2_2765_7_21 26031 27203 + GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg
TC HRGMv2_2765_7 HRGMv2_2765_7_22 27213 27965 + 9.B.198.1.4
Gene ID: HRGMv2_2765_7_15
Type: TC
Location: 19772 - 20533 (+)
Gene ID: HRGMv2_2765_7_16
Type: CAZyme
Location: 20541 - 21647 (+)
Gene ID: HRGMv2_2765_7_17
Type: pfam
Location: 21647 - 22558 (+)
Gene ID: HRGMv2_2765_7_18
Type: pfam
Location: 22574 - 23608 (+)
Gene ID: HRGMv2_2765_7_19
Type: CAZyme
Location: 23620 - 24597 (+)
Gene ID: HRGMv2_2765_7_20
Type:
Location: 24607 - 26034 (+)
Gene ID: HRGMv2_2765_7_21
Type: pfam
Location: 26031 - 27203 (+)
Gene ID: HRGMv2_2765_7_22
Type: TC
Location: 27213 - 27965 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Faecalibacterium
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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