Cluster: HRGMv2_2765_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2765
- CGC Family ID: CGCFAM_00041
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2765_41 | HRGMv2_2765_41_6 | 7045 | 7971 | + | 3.A.1.1.11 |
| TC | HRGMv2_2765_41 | HRGMv2_2765_41_7 | 7983 | 8840 | + | 3.A.1.1.11 |
| TF | HRGMv2_2765_41 | HRGMv2_2765_41_8 | 9142 | 9951 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2765_41 | HRGMv2_2765_41_9 | 10080 | 11636 | + | GH28 |
| CAZyme | HRGMv2_2765_41 | HRGMv2_2765_41_10 | 11640 | 12785 | + | GH105 |
| TC | HRGMv2_2765_41 | HRGMv2_2765_41_11 | 12850 | 14757 | - | 8.A.59.4.1 |
| TC | HRGMv2_2765_41 | HRGMv2_2765_41_12 | 14946 | 16301 | - | 2.A.8.1.8 |
Gene ID: HRGMv2_2765_41_6
Type: TC
Location: 7045 - 7971 (+)
Type: TC
Location: 7045 - 7971 (+)
Gene ID: HRGMv2_2765_41_7
Type: TC
Location: 7983 - 8840 (+)
Type: TC
Location: 7983 - 8840 (+)
Gene ID: HRGMv2_2765_41_8
Type: TF
Location: 9142 - 9951 (-)
Type: TF
Location: 9142 - 9951 (-)
Gene ID: HRGMv2_2765_41_9
Type: CAZyme
Location: 10080 - 11636 (+)
Type: CAZyme
Location: 10080 - 11636 (+)
Gene ID: HRGMv2_2765_41_10
Type: CAZyme
Location: 11640 - 12785 (+)
Type: CAZyme
Location: 11640 - 12785 (+)
Gene ID: HRGMv2_2765_41_11
Type: TC
Location: 12850 - 14757 (-)
Type: TC
Location: 12850 - 14757 (-)
Gene ID: HRGMv2_2765_41_12
Type: TC
Location: 14946 - 16301 (-)
Type: TC
Location: 14946 - 16301 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.