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Cluster: HRGMv2_2765_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2765_32 HRGMv2_2765_32_1 3 1217 - 3.A.1.5.19
TC HRGMv2_2765_32 HRGMv2_2765_32_2 1655 2986 - 2.A.23.1.2
STP HRGMv2_2765_32 HRGMv2_2765_32_3 3226 4797 - HD
TF HRGMv2_2765_32 HRGMv2_2765_32_4 5130 6890 - HTH_1
TC HRGMv2_2765_32 HRGMv2_2765_32_5 7039 7629 + 2.A.51.1.6
TC HRGMv2_2765_32 HRGMv2_2765_32_6 7631 8197 + 2.A.51.1.6
pfam HRGMv2_2765_32 HRGMv2_2765_32_7 8236 9069 - Hydrolase | S6PP | Hydrolase_3
CAZyme HRGMv2_2765_32 HRGMv2_2765_32_8 9080 10582 - GH25
TC HRGMv2_2765_32 HRGMv2_2765_32_9 11089 12147 + 9.A.23.1.1
STP HRGMv2_2765_32 HRGMv2_2765_32_10 12188 12697 - NUDIX
CAZyme HRGMv2_2765_32 HRGMv2_2765_32_11 12763 13353 - CBM13
Gene ID: HRGMv2_2765_32_1
Type: TC
Location: 3 - 1217 (-)
Gene ID: HRGMv2_2765_32_2
Type: TC
Location: 1655 - 2986 (-)
Gene ID: HRGMv2_2765_32_3
Type: STP
Location: 3226 - 4797 (-)
Gene ID: HRGMv2_2765_32_4
Type: TF
Location: 5130 - 6890 (-)
Gene ID: HRGMv2_2765_32_5
Type: TC
Location: 7039 - 7629 (+)
Gene ID: HRGMv2_2765_32_6
Type: TC
Location: 7631 - 8197 (+)
Gene ID: HRGMv2_2765_32_7
Type: pfam
Location: 8236 - 9069 (-)
Gene ID: HRGMv2_2765_32_8
Type: CAZyme
Location: 9080 - 10582 (-)
Gene ID: HRGMv2_2765_32_9
Type: TC
Location: 11089 - 12147 (+)
Gene ID: HRGMv2_2765_32_10
Type: STP
Location: 12188 - 12697 (-)
Gene ID: HRGMv2_2765_32_11
Type: CAZyme
Location: 12763 - 13353 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Faecalibacterium
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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