Cluster: HRGMv2_2765_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2765
- CGC Family ID: CGCFAM_00010
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2765_26 | HRGMv2_2765_26_12 | 15135 | 16610 | - | GH77 |
| TC | HRGMv2_2765_26 | HRGMv2_2765_26_13 | 16629 | 17471 | - | 3.A.1.1.45 |
| TC | HRGMv2_2765_26 | HRGMv2_2765_26_14 | 17471 | 18322 | - | 3.A.1.1.45 |
| TC | HRGMv2_2765_26 | HRGMv2_2765_26_15 | 18409 | 19746 | - | 3.A.1.1.45 |
| TF | HRGMv2_2765_26 | HRGMv2_2765_26_16 | 19809 | 20816 | - | LacI |
| TC | HRGMv2_2765_26 | HRGMv2_2765_26_17 | 21216 | 24455 | - | 3.A.1.122.2 |
Gene ID: HRGMv2_2765_26_12
Type: CAZyme
Location: 15135 - 16610 (-)
Type: CAZyme
Location: 15135 - 16610 (-)
Gene ID: HRGMv2_2765_26_13
Type: TC
Location: 16629 - 17471 (-)
Type: TC
Location: 16629 - 17471 (-)
Gene ID: HRGMv2_2765_26_14
Type: TC
Location: 17471 - 18322 (-)
Type: TC
Location: 17471 - 18322 (-)
Gene ID: HRGMv2_2765_26_15
Type: TC
Location: 18409 - 19746 (-)
Type: TC
Location: 18409 - 19746 (-)
Gene ID: HRGMv2_2765_26_16
Type: TF
Location: 19809 - 20816 (-)
Type: TF
Location: 19809 - 20816 (-)
Gene ID: HRGMv2_2765_26_17
Type: TC
Location: 21216 - 24455 (-)
Type: TC
Location: 21216 - 24455 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.