Cluster: HRGMv2_2765_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2765
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2765_25 | HRGMv2_2765_25_24 | 28223 | 31171 | + | GH3 |
| CAZyme | HRGMv2_2765_25 | HRGMv2_2765_25_25 | 31277 | 33700 | + | GH3 |
| pfam | HRGMv2_2765_25 | HRGMv2_2765_25_26 | 33716 | 34267 | + | GtrA_DPMS_TM |
| TC | HRGMv2_2765_25 | HRGMv2_2765_25_27 | 34495 | 34773 | + | 2.A.21.2.3 |
Gene ID: HRGMv2_2765_25_24
Type: CAZyme
Location: 28223 - 31171 (+)
Type: CAZyme
Location: 28223 - 31171 (+)
Gene ID: HRGMv2_2765_25_25
Type: CAZyme
Location: 31277 - 33700 (+)
Type: CAZyme
Location: 31277 - 33700 (+)
Gene ID: HRGMv2_2765_25_26
Type: pfam
Location: 33716 - 34267 (+)
Type: pfam
Location: 33716 - 34267 (+)
Gene ID: HRGMv2_2765_25_27
Type: TC
Location: 34495 - 34773 (+)
Type: TC
Location: 34495 - 34773 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.