Cluster: HRGMv2_2765_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2765
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2765_17 | HRGMv2_2765_17_24 | 27277 | 29673 | + | GT35 |
| CAZyme | HRGMv2_2765_17 | HRGMv2_2765_17_25 | 29747 | 31603 | + | GH13_39 |
| pfam | HRGMv2_2765_17 | HRGMv2_2765_17_26 | 31908 | 32366 | + | NfeD |
| TC | HRGMv2_2765_17 | HRGMv2_2765_17_27 | 32384 | 33292 | + | 8.A.21.2.2 |
Gene ID: HRGMv2_2765_17_24
Type: CAZyme
Location: 27277 - 29673 (+)
Type: CAZyme
Location: 27277 - 29673 (+)
Gene ID: HRGMv2_2765_17_25
Type: CAZyme
Location: 29747 - 31603 (+)
Type: CAZyme
Location: 29747 - 31603 (+)
Gene ID: HRGMv2_2765_17_26
Type: pfam
Location: 31908 - 32366 (+)
Type: pfam
Location: 31908 - 32366 (+)
Gene ID: HRGMv2_2765_17_27
Type: TC
Location: 32384 - 33292 (+)
Type: TC
Location: 32384 - 33292 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.