Cluster: HRGMv2_2765_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2765
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2765_13 | HRGMv2_2765_13_18 | 17962 | 19560 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_2765_13 | HRGMv2_2765_13_19 | 19574 | 20395 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2765_13 | HRGMv2_2765_13_20 | 20501 | 21634 | - | Acyl_transf_3 |
| TC | HRGMv2_2765_13 | HRGMv2_2765_13_21 | 22091 | 23572 | + | 4.C.1.1.6 |
| TC | HRGMv2_2765_13 | HRGMv2_2765_13_22 | 23702 | 25174 | + | 4.C.1.1.6 |
Gene ID: HRGMv2_2765_13_18
Type: CAZyme
Location: 17962 - 19560 (-)
Type: CAZyme
Location: 17962 - 19560 (-)
Gene ID: HRGMv2_2765_13_19
Type:
Location: 19574 - 20395 (-)
Type:
Location: 19574 - 20395 (-)
Gene ID: HRGMv2_2765_13_20
Type: pfam
Location: 20501 - 21634 (-)
Type: pfam
Location: 20501 - 21634 (-)
Gene ID: HRGMv2_2765_13_21
Type: TC
Location: 22091 - 23572 (+)
Type: TC
Location: 22091 - 23572 (+)
Gene ID: HRGMv2_2765_13_22
Type: TC
Location: 23702 - 25174 (+)
Type: TC
Location: 23702 - 25174 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.