Cluster: HRGMv2_2765_CGC11
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2765
- CGC Family ID: CGCFAM_01576
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2765_10 | HRGMv2_2765_10_18 | 14534 | 15343 | + | 3.A.1.103.6 |
| TC | HRGMv2_2765_10 | HRGMv2_2765_10_19 | 15360 | 16103 | + | 3.A.1.103.1 |
| CAZyme | HRGMv2_2765_10 | HRGMv2_2765_10_20 | 16107 | 17987 | + | GT2 |
| pfam | HRGMv2_2765_10 | HRGMv2_2765_10_21 | 17984 | 18520 | + | DUF5662 |
| NULL(UNKNOWN) | HRGMv2_2765_10 | HRGMv2_2765_10_22 | 18583 | 18705 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2765_10 | HRGMv2_2765_10_23 | 19037 | 20359 | + | 3.D.6.1.2 |
| TC | HRGMv2_2765_10 | HRGMv2_2765_10_24 | 20359 | 21312 | + | 3.D.6.1.2 |
| pfam | HRGMv2_2765_10 | HRGMv2_2765_10_25 | 21309 | 21854 | + | FMN_bind |
| TC | HRGMv2_2765_10 | HRGMv2_2765_10_26 | 21871 | 22533 | + | 3.D.6.1.2 |
| TC | HRGMv2_2765_10 | HRGMv2_2765_10_27 | 22538 | 23170 | + | 3.D.6.1.2 |
| TC | HRGMv2_2765_10 | HRGMv2_2765_10_28 | 23186 | 24112 | + | 3.D.6.1.3 |
| TC | HRGMv2_2765_10 | HRGMv2_2765_10_29 | 24473 | 25603 | + | 2.A.1.15.18 |
Gene ID: HRGMv2_2765_10_18
Type: TC
Location: 14534 - 15343 (+)
Type: TC
Location: 14534 - 15343 (+)
Gene ID: HRGMv2_2765_10_19
Type: TC
Location: 15360 - 16103 (+)
Type: TC
Location: 15360 - 16103 (+)
Gene ID: HRGMv2_2765_10_20
Type: CAZyme
Location: 16107 - 17987 (+)
Type: CAZyme
Location: 16107 - 17987 (+)
Gene ID: HRGMv2_2765_10_21
Type: pfam
Location: 17984 - 18520 (+)
Type: pfam
Location: 17984 - 18520 (+)
Gene ID: HRGMv2_2765_10_22
Type:
Location: 18583 - 18705 (-)
Type:
Location: 18583 - 18705 (-)
Gene ID: HRGMv2_2765_10_23
Type: TC
Location: 19037 - 20359 (+)
Type: TC
Location: 19037 - 20359 (+)
Gene ID: HRGMv2_2765_10_24
Type: TC
Location: 20359 - 21312 (+)
Type: TC
Location: 20359 - 21312 (+)
Gene ID: HRGMv2_2765_10_25
Type: pfam
Location: 21309 - 21854 (+)
Type: pfam
Location: 21309 - 21854 (+)
Gene ID: HRGMv2_2765_10_26
Type: TC
Location: 21871 - 22533 (+)
Type: TC
Location: 21871 - 22533 (+)
Gene ID: HRGMv2_2765_10_27
Type: TC
Location: 22538 - 23170 (+)
Type: TC
Location: 22538 - 23170 (+)
Gene ID: HRGMv2_2765_10_28
Type: TC
Location: 23186 - 24112 (+)
Type: TC
Location: 23186 - 24112 (+)
Gene ID: HRGMv2_2765_10_29
Type: TC
Location: 24473 - 25603 (+)
Type: TC
Location: 24473 - 25603 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.