Cluster: HRGMv2_2761_CGC15
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2761
- CGC Family ID: CGCFAM_09256
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2761_25 | HRGMv2_2761_25_20 | 19431 | 20843 | - | 9.A.11.1.1 |
| TF | HRGMv2_2761_25 | HRGMv2_2761_25_21 | 21014 | 21556 | + | SpoVT_AbrB |
| pfam | HRGMv2_2761_25 | HRGMv2_2761_25_22 | 21965 | 23644 | + | FTHFS |
| CAZyme | HRGMv2_2761_25 | HRGMv2_2761_25_23 | 23947 | 26421 | + | GH39 |
| NULL(UNKNOWN) | HRGMv2_2761_25 | HRGMv2_2761_25_24 | 26608 | 26772 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2761_25 | HRGMv2_2761_25_25 | 26766 | 26885 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2761_25 | HRGMv2_2761_25_26 | 27033 | 28454 | - | CE4 |
| STP | HRGMv2_2761_25 | HRGMv2_2761_25_27 | 28718 | 29281 | + | NUDIX |
| CAZyme | HRGMv2_2761_25 | HRGMv2_2761_25_28 | 29371 | 31266 | + | GH13_39 |
| NULL(UNKNOWN) | HRGMv2_2761_25 | HRGMv2_2761_25_29 | 31402 | 31650 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2761_25 | HRGMv2_2761_25_30 | 31651 | 32466 | - | 1.A.23.2.2 |
Gene ID: HRGMv2_2761_25_20
Type: TC
Location: 19431 - 20843 (-)
Type: TC
Location: 19431 - 20843 (-)
Gene ID: HRGMv2_2761_25_21
Type: TF
Location: 21014 - 21556 (+)
Type: TF
Location: 21014 - 21556 (+)
Gene ID: HRGMv2_2761_25_22
Type: pfam
Location: 21965 - 23644 (+)
Type: pfam
Location: 21965 - 23644 (+)
Gene ID: HRGMv2_2761_25_23
Type: CAZyme
Location: 23947 - 26421 (+)
Type: CAZyme
Location: 23947 - 26421 (+)
Gene ID: HRGMv2_2761_25_24
Type:
Location: 26608 - 26772 (+)
Type:
Location: 26608 - 26772 (+)
Gene ID: HRGMv2_2761_25_25
Type:
Location: 26766 - 26885 (+)
Type:
Location: 26766 - 26885 (+)
Gene ID: HRGMv2_2761_25_26
Type: CAZyme
Location: 27033 - 28454 (-)
Type: CAZyme
Location: 27033 - 28454 (-)
Gene ID: HRGMv2_2761_25_27
Type: STP
Location: 28718 - 29281 (+)
Type: STP
Location: 28718 - 29281 (+)
Gene ID: HRGMv2_2761_25_28
Type: CAZyme
Location: 29371 - 31266 (+)
Type: CAZyme
Location: 29371 - 31266 (+)
Gene ID: HRGMv2_2761_25_29
Type:
Location: 31402 - 31650 (-)
Type:
Location: 31402 - 31650 (-)
Gene ID: HRGMv2_2761_25_30
Type: TC
Location: 31651 - 32466 (-)
Type: TC
Location: 31651 - 32466 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
JAGZMM01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.