Cluster: HRGMv2_2758_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2758
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2758_31 | HRGMv2_2758_31_19 | 16726 | 18264 | - | 3.A.1.2.17 |
| pfam | HRGMv2_2758_31 | HRGMv2_2758_31_20 | 18419 | 19648 | - | Bmp |
| STP | HRGMv2_2758_31 | HRGMv2_2758_31_21 | 19988 | 20563 | - | Pribosyltran |
| TC | HRGMv2_2758_31 | HRGMv2_2758_31_22 | 20791 | 22266 | + | 2.A.2.2.3 |
| CAZyme | HRGMv2_2758_31 | HRGMv2_2758_31_23 | 22263 | 23027 | + | CE14 |
Gene ID: HRGMv2_2758_31_19
Type: TC
Location: 16726 - 18264 (-)
Type: TC
Location: 16726 - 18264 (-)
Gene ID: HRGMv2_2758_31_20
Type: pfam
Location: 18419 - 19648 (-)
Type: pfam
Location: 18419 - 19648 (-)
Gene ID: HRGMv2_2758_31_21
Type: STP
Location: 19988 - 20563 (-)
Type: STP
Location: 19988 - 20563 (-)
Gene ID: HRGMv2_2758_31_22
Type: TC
Location: 20791 - 22266 (+)
Type: TC
Location: 20791 - 22266 (+)
Gene ID: HRGMv2_2758_31_23
Type: CAZyme
Location: 22263 - 23027 (+)
Type: CAZyme
Location: 22263 - 23027 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
F23-B02
Species
F23-B02 sp001916715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2758_31_22 | vegetarian > vegan | 1.09228 | 0.02677 |