Cluster: HRGMv2_2758_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2758
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2758_31 | HRGMv2_2758_31_4 | 3008 | 3802 | - | 3.D.6.1.2 |
| TC | HRGMv2_2758_31 | HRGMv2_2758_31_5 | 3818 | 4402 | - | 3.D.6.1.2 |
| TC | HRGMv2_2758_31 | HRGMv2_2758_31_6 | 4402 | 5061 | - | 3.D.6.1.2 |
| TC | HRGMv2_2758_31 | HRGMv2_2758_31_7 | 5073 | 5597 | - | 3.D.6.1.3 |
| TC | HRGMv2_2758_31 | HRGMv2_2758_31_8 | 5597 | 6625 | - | 3.D.6.1.2 |
| TC | HRGMv2_2758_31 | HRGMv2_2758_31_9 | 6622 | 7974 | - | 3.D.6.1.2 |
| CAZyme | HRGMv2_2758_31 | HRGMv2_2758_31_10 | 8268 | 9959 | + | GH2 |
Gene ID: HRGMv2_2758_31_4
Type: TC
Location: 3008 - 3802 (-)
Type: TC
Location: 3008 - 3802 (-)
Gene ID: HRGMv2_2758_31_5
Type: TC
Location: 3818 - 4402 (-)
Type: TC
Location: 3818 - 4402 (-)
Gene ID: HRGMv2_2758_31_6
Type: TC
Location: 4402 - 5061 (-)
Type: TC
Location: 4402 - 5061 (-)
Gene ID: HRGMv2_2758_31_7
Type: TC
Location: 5073 - 5597 (-)
Type: TC
Location: 5073 - 5597 (-)
Gene ID: HRGMv2_2758_31_8
Type: TC
Location: 5597 - 6625 (-)
Type: TC
Location: 5597 - 6625 (-)
Gene ID: HRGMv2_2758_31_9
Type: TC
Location: 6622 - 7974 (-)
Type: TC
Location: 6622 - 7974 (-)
Gene ID: HRGMv2_2758_31_10
Type: CAZyme
Location: 8268 - 9959 (+)
Type: CAZyme
Location: 8268 - 9959 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
F23-B02
Species
F23-B02 sp001916715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2758_31_7 | vegetarian > omnivore | 1.08738 | 0.00560 |
| HRGMv2_2758_31_7 | vegetarian > vegan | 1.11411 | 0.02677 |
| HRGMv2_2758_31_9 | vegetarian > omnivore | 1.38569 | 0.00560 |