Cluster: HRGMv2_2758_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2758
- CGC Family ID: CGCFAM_03054
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2758_10 | HRGMv2_2758_10_25 | 23138 | 25474 | - | GH36 |
| NULL(UNKNOWN) | HRGMv2_2758_10 | HRGMv2_2758_10_26 | 25526 | 25657 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2758_10 | HRGMv2_2758_10_27 | 25778 | 27382 | + | 3.A.1.121.4 |
| pfam | HRGMv2_2758_10 | HRGMv2_2758_10_28 | 27411 | 28010 | - | Acetyltransf_1 | Acetyltransf_4 | Acetyltransf_7 |
| CAZyme | HRGMv2_2758_10 | HRGMv2_2758_10_29 | 28007 | 29500 | - | GH77 |
Gene ID: HRGMv2_2758_10_25
Type: CAZyme
Location: 23138 - 25474 (-)
Type: CAZyme
Location: 23138 - 25474 (-)
Gene ID: HRGMv2_2758_10_26
Type:
Location: 25526 - 25657 (-)
Type:
Location: 25526 - 25657 (-)
Gene ID: HRGMv2_2758_10_27
Type: TC
Location: 25778 - 27382 (+)
Type: TC
Location: 25778 - 27382 (+)
Gene ID: HRGMv2_2758_10_28
Type: pfam
Location: 27411 - 28010 (-)
Type: pfam
Location: 27411 - 28010 (-)
Gene ID: HRGMv2_2758_10_29
Type: CAZyme
Location: 28007 - 29500 (-)
Type: CAZyme
Location: 28007 - 29500 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
F23-B02
Species
F23-B02 sp001916715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.