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Cluster: HRGMv2_2758_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2758_6 HRGMv2_2758_6_26 33266 34126 - 2.A.7.2.1
pfam HRGMv2_2758_6 HRGMv2_2758_6_27 34274 37519 - SLH | SLH | SLH | Lipase_3
NULL(UNKNOWN) HRGMv2_2758_6 HRGMv2_2758_6_28 37532 38326 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2758_6 HRGMv2_2758_6_29 38345 40651 - GH2
pfam HRGMv2_2758_6 HRGMv2_2758_6_30 40775 41572 + Hydrolase | PGP_phosphatase | Hydrolase_like | Hydrolase_6
pfam HRGMv2_2758_6 HRGMv2_2758_6_31 41641 42105 + SmpB
TC HRGMv2_2758_6 HRGMv2_2758_6_32 42105 42623 + 3.D.1.8.1
Gene ID: HRGMv2_2758_6_26
Type: TC
Location: 33266 - 34126 (-)
Gene ID: HRGMv2_2758_6_27
Type: pfam
Location: 34274 - 37519 (-)
Gene ID: HRGMv2_2758_6_28
Type:
Location: 37532 - 38326 (-)
Gene ID: HRGMv2_2758_6_29
Type: CAZyme
Location: 38345 - 40651 (-)
Gene ID: HRGMv2_2758_6_30
Type: pfam
Location: 40775 - 41572 (+)
Gene ID: HRGMv2_2758_6_31
Type: pfam
Location: 41641 - 42105 (+)
Gene ID: HRGMv2_2758_6_32
Type: TC
Location: 42105 - 42623 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2758_6_28 vegetarian > vegan 1.53622 0.02677
HRGMv2_2758_6_31 vegetarian > vegan 1.35636 0.02677

🧭 Explore Read Mapping of CGC

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