Cluster: HRGMv2_2758_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2758
- CGC Family ID: CGCFAM_02853
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2758_36 | HRGMv2_2758_36_15 | 15928 | 16260 | - | 2.A.78.1.1 |
| TC | HRGMv2_2758_36 | HRGMv2_2758_36_16 | 16257 | 16955 | - | 2.A.78.1.1 |
| pfam | HRGMv2_2758_36 | HRGMv2_2758_36_17 | 17016 | 17252 | - | SecG |
| CAZyme | HRGMv2_2758_36 | HRGMv2_2758_36_18 | 17342 | 18655 | - | GT76 |
| TC | HRGMv2_2758_36 | HRGMv2_2758_36_19 | 18763 | 20127 | + | 2.A.66.1.37 |
Gene ID: HRGMv2_2758_36_15
Type: TC
Location: 15928 - 16260 (-)
Type: TC
Location: 15928 - 16260 (-)
Gene ID: HRGMv2_2758_36_16
Type: TC
Location: 16257 - 16955 (-)
Type: TC
Location: 16257 - 16955 (-)
Gene ID: HRGMv2_2758_36_17
Type: pfam
Location: 17016 - 17252 (-)
Type: pfam
Location: 17016 - 17252 (-)
Gene ID: HRGMv2_2758_36_18
Type: CAZyme
Location: 17342 - 18655 (-)
Type: CAZyme
Location: 17342 - 18655 (-)
Gene ID: HRGMv2_2758_36_19
Type: TC
Location: 18763 - 20127 (+)
Type: TC
Location: 18763 - 20127 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
F23-B02
Species
F23-B02 sp001916715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2758_36_16 | vegetarian > vegan | 1.27857 | 0.02677 |