Cluster: HRGMv2_2756_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2756
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2756_12 | HRGMv2_2756_12_7 | 11344 | 12531 | - | GT4 |
| CAZyme | HRGMv2_2756_12 | HRGMv2_2756_12_8 | 12528 | 13649 | - | GT4 |
| CAZyme | HRGMv2_2756_12 | HRGMv2_2756_12_9 | 13663 | 14880 | - | GT4 |
| TC | HRGMv2_2756_12 | HRGMv2_2756_12_10 | 14941 | 15606 | - | 9.B.18.1.3 |
Gene ID: HRGMv2_2756_12_7
Type: CAZyme
Location: 11344 - 12531 (-)
Type: CAZyme
Location: 11344 - 12531 (-)
Gene ID: HRGMv2_2756_12_8
Type: CAZyme
Location: 12528 - 13649 (-)
Type: CAZyme
Location: 12528 - 13649 (-)
Gene ID: HRGMv2_2756_12_9
Type: CAZyme
Location: 13663 - 14880 (-)
Type: CAZyme
Location: 13663 - 14880 (-)
Gene ID: HRGMv2_2756_12_10
Type: TC
Location: 14941 - 15606 (-)
Type: TC
Location: 14941 - 15606 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Onthomonas
Species
Onthomonas sp900545815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2756_12_7 | vegan > omnivore | 2.46976 | 0.04449 |
| HRGMv2_2756_12_8 | vegan > omnivore | 1.70543 | 0.04449 |
| HRGMv2_2756_12_10 | vegetarian > vegan | 1.18349 | 0.00364 |