Cluster: HRGMv2_2756_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2756
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2756_4 | HRGMv2_2756_4_54 | 56314 | 58104 | - | 3.A.16.1.1 |
| CAZyme | HRGMv2_2756_4 | HRGMv2_2756_4_55 | 58357 | 59628 | - | GH25 |
| pfam | HRGMv2_2756_4 | HRGMv2_2756_4_56 | 60071 | 60643 | + | UDG |
| peptidase | HRGMv2_2756_4 | HRGMv2_2756_4_57 | 60631 | 61275 | - | C26.UPW |
| TC | HRGMv2_2756_4 | HRGMv2_2756_4_58 | 61538 | 62755 | - | 2.A.86.1.8 |
Gene ID: HRGMv2_2756_4_54
Type: TC
Location: 56314 - 58104 (-)
Type: TC
Location: 56314 - 58104 (-)
Gene ID: HRGMv2_2756_4_55
Type: CAZyme
Location: 58357 - 59628 (-)
Type: CAZyme
Location: 58357 - 59628 (-)
Gene ID: HRGMv2_2756_4_56
Type: pfam
Location: 60071 - 60643 (+)
Type: pfam
Location: 60071 - 60643 (+)
Gene ID: HRGMv2_2756_4_57
Type: peptidase
Location: 60631 - 61275 (-)
Type: peptidase
Location: 60631 - 61275 (-)
Gene ID: HRGMv2_2756_4_58
Type: TC
Location: 61538 - 62755 (-)
Type: TC
Location: 61538 - 62755 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Onthomonas
Species
Onthomonas sp900545815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2756_4_55 | vegetarian > vegan | 1.48972 | 0.00364 |
| HRGMv2_2756_4_58 | vegetarian > vegan | 2.09480 | 0.00364 |