Cluster: HRGMv2_2756_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2756
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2756_3 | HRGMv2_2756_3_12 | 13622 | 14401 | + | CE4 |
| pfam | HRGMv2_2756_3 | HRGMv2_2756_3_13 | 14576 | 14791 | + | DUF378 |
| NULL(UNKNOWN) | HRGMv2_2756_3 | HRGMv2_2756_3_14 | 14834 | 15043 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2756_3 | HRGMv2_2756_3_15 | 15079 | 16206 | - | 9.A.5.3.2 |
Gene ID: HRGMv2_2756_3_12
Type: CAZyme
Location: 13622 - 14401 (+)
Type: CAZyme
Location: 13622 - 14401 (+)
Gene ID: HRGMv2_2756_3_13
Type: pfam
Location: 14576 - 14791 (+)
Type: pfam
Location: 14576 - 14791 (+)
Gene ID: HRGMv2_2756_3_14
Type:
Location: 14834 - 15043 (-)
Type:
Location: 14834 - 15043 (-)
Gene ID: HRGMv2_2756_3_15
Type: TC
Location: 15079 - 16206 (-)
Type: TC
Location: 15079 - 16206 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Onthomonas
Species
Onthomonas sp900545815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2756_3_12 | vegetarian > vegan | 1.23186 | 0.00364 |
| HRGMv2_2756_3_13 | vegetarian > vegan | 1.07961 | 0.00364 |
| HRGMv2_2756_3_14 | vegetarian > vegan | 2.17797 | 0.00364 |
| HRGMv2_2756_3_15 | vegetarian > vegan | 2.44371 | 0.00364 |