Cluster: HRGMv2_2756_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: beta-mannan
- Genome ID: HRGMv2_2756
- CGC Family ID: CGCFAM_00066
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2756_37 | HRGMv2_2756_37_3 | 3055 | 4470 | + | GH1 |
| TC | HRGMv2_2756_37 | HRGMv2_2756_37_4 | 4486 | 4839 | + | 4.A.3.1.2 |
| TC | HRGMv2_2756_37 | HRGMv2_2756_37_5 | 4892 | 5200 | + | 4.A.3.2.5 |
| TC | HRGMv2_2756_37 | HRGMv2_2756_37_6 | 5204 | 6475 | + | 4.A.3.2.8 |
Gene ID: HRGMv2_2756_37_3
Type: CAZyme
Location: 3055 - 4470 (+)
Type: CAZyme
Location: 3055 - 4470 (+)
Gene ID: HRGMv2_2756_37_4
Type: TC
Location: 4486 - 4839 (+)
Type: TC
Location: 4486 - 4839 (+)
Gene ID: HRGMv2_2756_37_5
Type: TC
Location: 4892 - 5200 (+)
Type: TC
Location: 4892 - 5200 (+)
Gene ID: HRGMv2_2756_37_6
Type: TC
Location: 5204 - 6475 (+)
Type: TC
Location: 5204 - 6475 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Onthomonas
Species
Onthomonas sp900545815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2756_37_3 | vegan > omnivore | 1.23412 | 0.04449 |