dbCAN Logo

Cluster: HRGMv2_2756_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2756_14 HRGMv2_2756_14_42 45308 47050 - 2.A.114.1.3
NULL(UNKNOWN) HRGMv2_2756_14 HRGMv2_2756_14_43 47082 47627 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2756_14 HRGMv2_2756_14_44 48020 50341 - GT35
CAZyme HRGMv2_2756_14 HRGMv2_2756_14_45 50334 51854 - GH77
TC HRGMv2_2756_14 HRGMv2_2756_14_46 52048 53613 - 2.A.35.2.1
STP HRGMv2_2756_14 HRGMv2_2756_14_47 54041 54571 + SKI
TC HRGMv2_2756_14 HRGMv2_2756_14_48 54598 55251 + 1.A.62.2.1
Gene ID: HRGMv2_2756_14_42
Type: TC
Location: 45308 - 47050 (-)
Gene ID: HRGMv2_2756_14_43
Type:
Location: 47082 - 47627 (-)
Gene ID: HRGMv2_2756_14_44
Type: CAZyme
Location: 48020 - 50341 (-)
Gene ID: HRGMv2_2756_14_45
Type: CAZyme
Location: 50334 - 51854 (-)
Gene ID: HRGMv2_2756_14_46
Type: TC
Location: 52048 - 53613 (-)
Gene ID: HRGMv2_2756_14_47
Type: STP
Location: 54041 - 54571 (+)
Gene ID: HRGMv2_2756_14_48
Type: TC
Location: 54598 - 55251 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2756_14_43 vegetarian > vegan 1.47773 0.00364
HRGMv2_2756_14_47 vegetarian > vegan 4.15849 0.00364
HRGMv2_2756_14_48 vegetarian > vegan 1.79978 0.00364

🧭 Explore Read Mapping of CGC

← Back to Cluster List