Cluster: HRGMv2_2756_CGC1

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_2756_1	HRGMv2_2756_1_105	115676	117481	+	GH13_39
TC	HRGMv2_2756_1	HRGMv2_2756_1_106	117494	118846	-	2.A.66.1.33
TF	HRGMv2_2756_1	HRGMv2_2756_1_107	119023	119910	+	HTH_1
TC	HRGMv2_2756_1	HRGMv2_2756_1_108	119946	120710	+	2.A.102.3.2
STP	HRGMv2_2756_1	HRGMv2_2756_1_109	120997	121428	-	CBS \| CBS
TC	HRGMv2_2756_1	HRGMv2_2756_1_110	121532	123058	-	9.B.160.1.10

Gene ID: HRGMv2_2756_1_105
Type: CAZyme
Location: 115676 - 117481 (+)

Gene ID: HRGMv2_2756_1_106
Type: TC
Location: 117494 - 118846 (-)

Gene ID: HRGMv2_2756_1_107
Type: TF
Location: 119023 - 119910 (+)

Gene ID: HRGMv2_2756_1_108
Type: TC
Location: 119946 - 120710 (+)

Gene ID: HRGMv2_2756_1_109
Type: STP
Location: 120997 - 121428 (-)

Gene ID: HRGMv2_2756_1_110
Type: TC
Location: 121532 - 123058 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2756_1_106	vegetarian > vegan	2.72077	0.00364
HRGMv2_2756_1_107	vegetarian > vegan	3.24920	0.00364
HRGMv2_2756_1_108	vegetarian > vegan	1.84300	0.00364
HRGMv2_2756_1_109	vegetarian > vegan	2.20359	0.00364
HRGMv2_2756_1_110	vegetarian > vegan	1.64075	0.00364