dbCAN Logo

Cluster: HRGMv2_2747_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2747_1 HRGMv2_2747_1_305 312494 314155 - 2.A.58.2.2
pfam HRGMv2_2747_1 HRGMv2_2747_1_306 314654 315007 + Glutaredoxin | ArsC
pfam HRGMv2_2747_1 HRGMv2_2747_1_307 315141 315974 - AP_endonuc_2
CAZyme HRGMv2_2747_1 HRGMv2_2747_1_308 316049 317257 - GH179
TF HRGMv2_2747_1 HRGMv2_2747_1_309 317390 318196 + HTH_AraC | HTH_AraC
pfam HRGMv2_2747_1 HRGMv2_2747_1_310 318285 319139 - AP_endonuc_2
CAZyme HRGMv2_2747_1 HRGMv2_2747_1_311 319523 321526 + GH31_4
pfam HRGMv2_2747_1 HRGMv2_2747_1_312 321533 321973 + Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_9 | Acetyltransf_10
TC HRGMv2_2747_1 HRGMv2_2747_1_313 322120 323148 + 3.A.1.141.2
NULL(UNKNOWN) HRGMv2_2747_1 HRGMv2_2747_1_314 323145 323948 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2747_1 HRGMv2_2747_1_315 323952 324728 + ABC2_membrane_6
TC HRGMv2_2747_1 HRGMv2_2747_1_316 324767 326647 - 3.A.1.111.2
TC HRGMv2_2747_1 HRGMv2_2747_1_317 326628 328469 - 3.A.1.111.2
Gene ID: HRGMv2_2747_1_305
Type: TC
Location: 312494 - 314155 (-)
Gene ID: HRGMv2_2747_1_306
Type: pfam
Location: 314654 - 315007 (+)
Gene ID: HRGMv2_2747_1_307
Type: pfam
Location: 315141 - 315974 (-)
Gene ID: HRGMv2_2747_1_308
Type: CAZyme
Location: 316049 - 317257 (-)
Gene ID: HRGMv2_2747_1_309
Type: TF
Location: 317390 - 318196 (+)
Gene ID: HRGMv2_2747_1_310
Type: pfam
Location: 318285 - 319139 (-)
Gene ID: HRGMv2_2747_1_311
Type: CAZyme
Location: 319523 - 321526 (+)
Gene ID: HRGMv2_2747_1_312
Type: pfam
Location: 321533 - 321973 (+)
Gene ID: HRGMv2_2747_1_313
Type: TC
Location: 322120 - 323148 (+)
Gene ID: HRGMv2_2747_1_314
Type:
Location: 323145 - 323948 (+)
Gene ID: HRGMv2_2747_1_315
Type: pfam
Location: 323952 - 324728 (+)
Gene ID: HRGMv2_2747_1_316
Type: TC
Location: 324767 - 326647 (-)
Gene ID: HRGMv2_2747_1_317
Type: TC
Location: 326628 - 328469 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List