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Cluster: HRGMv2_2747_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2747_24 HRGMv2_2747_24_1 451 1869 + GH32
CAZyme HRGMv2_2747_24 HRGMv2_2747_24_2 1888 3312 + GH32
TC HRGMv2_2747_24 HRGMv2_2747_24_3 3367 4293 + 3.A.1.1.10
TC HRGMv2_2747_24 HRGMv2_2747_24_4 4307 5215 + 3.A.1.1.10
STP HRGMv2_2747_24 HRGMv2_2747_24_5 5273 7069 + SBP_bac_1
TF HRGMv2_2747_24 HRGMv2_2747_24_6 7300 8151 - HTH_1
TC HRGMv2_2747_24 HRGMv2_2747_24_7 8280 10058 + 3.A.1.135.5
TC HRGMv2_2747_24 HRGMv2_2747_24_8 10048 11820 + 3.A.1.135.5
Gene ID: HRGMv2_2747_24_1
Type: CAZyme
Location: 451 - 1869 (+)
Gene ID: HRGMv2_2747_24_2
Type: CAZyme
Location: 1888 - 3312 (+)
Gene ID: HRGMv2_2747_24_3
Type: TC
Location: 3367 - 4293 (+)
Gene ID: HRGMv2_2747_24_4
Type: TC
Location: 4307 - 5215 (+)
Gene ID: HRGMv2_2747_24_5
Type: STP
Location: 5273 - 7069 (+)
Gene ID: HRGMv2_2747_24_6
Type: TF
Location: 7300 - 8151 (-)
Gene ID: HRGMv2_2747_24_7
Type: TC
Location: 8280 - 10058 (+)
Gene ID: HRGMv2_2747_24_8
Type: TC
Location: 10048 - 11820 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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