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Cluster: HRGMv2_2747_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2747_23 HRGMv2_2747_23_2 1669 2760 - GH5_44
TC HRGMv2_2747_23 HRGMv2_2747_23_3 2920 4500 - 3.A.1.147.6
TC HRGMv2_2747_23 HRGMv2_2747_23_4 4497 5213 - 3.A.1.147.6
TC HRGMv2_2747_23 HRGMv2_2747_23_5 5401 6438 - 4.D.2.1.5
pfam HRGMv2_2747_23 HRGMv2_2747_23_6 6592 7359 - Pan_kinase
TC HRGMv2_2747_23 HRGMv2_2747_23_7 7430 7948 - 9.B.156.3.1
TC HRGMv2_2747_23 HRGMv2_2747_23_8 8002 8580 - 9.B.156.3.1
Gene ID: HRGMv2_2747_23_2
Type: CAZyme
Location: 1669 - 2760 (-)
Gene ID: HRGMv2_2747_23_3
Type: TC
Location: 2920 - 4500 (-)
Gene ID: HRGMv2_2747_23_4
Type: TC
Location: 4497 - 5213 (-)
Gene ID: HRGMv2_2747_23_5
Type: TC
Location: 5401 - 6438 (-)
Gene ID: HRGMv2_2747_23_6
Type: pfam
Location: 6592 - 7359 (-)
Gene ID: HRGMv2_2747_23_7
Type: TC
Location: 7430 - 7948 (-)
Gene ID: HRGMv2_2747_23_8
Type: TC
Location: 8002 - 8580 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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