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Cluster: HRGMv2_2747_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2747_16 HRGMv2_2747_16_38 49818 50759 - 2.A.69.3.6
STP HRGMv2_2747_16 HRGMv2_2747_16_39 50752 51678 - PfkB
CAZyme HRGMv2_2747_16 HRGMv2_2747_16_40 52036 54027 - GH42
STP HRGMv2_2747_16 HRGMv2_2747_16_41 54190 55740 - SBP_bac_1
TC HRGMv2_2747_16 HRGMv2_2747_16_42 55786 56700 - 3.A.1.1.29
TC HRGMv2_2747_16 HRGMv2_2747_16_43 56720 57646 - 3.A.1.1.29
TC HRGMv2_2747_16 HRGMv2_2747_16_44 57931 59760 - 8.A.59.2.1
Gene ID: HRGMv2_2747_16_38
Type: TC
Location: 49818 - 50759 (-)
Gene ID: HRGMv2_2747_16_39
Type: STP
Location: 50752 - 51678 (-)
Gene ID: HRGMv2_2747_16_40
Type: CAZyme
Location: 52036 - 54027 (-)
Gene ID: HRGMv2_2747_16_41
Type: STP
Location: 54190 - 55740 (-)
Gene ID: HRGMv2_2747_16_42
Type: TC
Location: 55786 - 56700 (-)
Gene ID: HRGMv2_2747_16_43
Type: TC
Location: 56720 - 57646 (-)
Gene ID: HRGMv2_2747_16_44
Type: TC
Location: 57931 - 59760 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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