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Cluster: HRGMv2_2747_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2747_7 HRGMv2_2747_7_28 35995 38550 - GH2
NULL(UNKNOWN) HRGMv2_2747_7 HRGMv2_2747_7_29 38629 40236 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2747_7 HRGMv2_2747_7_30 40290 41171 - 3.A.1.1.29
TC HRGMv2_2747_7 HRGMv2_2747_7_31 41171 42103 - 3.A.1.1.10
TF HRGMv2_2747_7 HRGMv2_2747_7_32 42271 43371 + HTH_AraC
TC HRGMv2_2747_7 HRGMv2_2747_7_33 43368 45161 + 8.A.59.2.1
TF HRGMv2_2747_7 HRGMv2_2747_7_34 45354 45620 + HTH_3
NULL(UNKNOWN) HRGMv2_2747_7 HRGMv2_2747_7_35 45887 46156 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2747_7 HRGMv2_2747_7_36 46358 46810 - 1.A.22.1.3
TC HRGMv2_2747_7 HRGMv2_2747_7_37 47250 48842 + 3.A.1.121.4
CAZyme HRGMv2_2747_7 HRGMv2_2747_7_38 48912 49757 - CE1
Gene ID: HRGMv2_2747_7_28
Type: CAZyme
Location: 35995 - 38550 (-)
Gene ID: HRGMv2_2747_7_29
Type:
Location: 38629 - 40236 (-)
Gene ID: HRGMv2_2747_7_30
Type: TC
Location: 40290 - 41171 (-)
Gene ID: HRGMv2_2747_7_31
Type: TC
Location: 41171 - 42103 (-)
Gene ID: HRGMv2_2747_7_32
Type: TF
Location: 42271 - 43371 (+)
Gene ID: HRGMv2_2747_7_33
Type: TC
Location: 43368 - 45161 (+)
Gene ID: HRGMv2_2747_7_34
Type: TF
Location: 45354 - 45620 (+)
Gene ID: HRGMv2_2747_7_35
Type:
Location: 45887 - 46156 (+)
Gene ID: HRGMv2_2747_7_36
Type: TC
Location: 46358 - 46810 (-)
Gene ID: HRGMv2_2747_7_37
Type: TC
Location: 47250 - 48842 (+)
Gene ID: HRGMv2_2747_7_38
Type: CAZyme
Location: 48912 - 49757 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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