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Cluster: HRGMv2_2747_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2747_4 HRGMv2_2747_4_89 102833 103591 - 3.A.1.3.24
TC HRGMv2_2747_4 HRGMv2_2747_4_90 103604 104266 - 3.A.1.3.17
TC HRGMv2_2747_4 HRGMv2_2747_4_91 104338 105165 - 3.A.1.3.14
TC HRGMv2_2747_4 HRGMv2_2747_4_92 105392 106219 - 3.A.1.3.10
pfam HRGMv2_2747_4 HRGMv2_2747_4_93 106429 108147 - ILVD_EDD_N | ILV_EDD_C
CAZyme HRGMv2_2747_4 HRGMv2_2747_4_94 108195 110750 - GH2
pfam HRGMv2_2747_4 HRGMv2_2747_4_95 111004 111729 + DHquinase_I
pfam HRGMv2_2747_4 HRGMv2_2747_4_96 111780 112793 - Asparaginase_II
TC HRGMv2_2747_4 HRGMv2_2747_4_97 112984 113754 + 9.B.158.1.1
TC HRGMv2_2747_4 HRGMv2_2747_4_98 113758 115845 + 3.A.24.1.1
pfam HRGMv2_2747_4 HRGMv2_2747_4_99 116146 116823 + DUF421
TC HRGMv2_2747_4 HRGMv2_2747_4_100 117093 118199 + 9.B.10.1.1
Gene ID: HRGMv2_2747_4_89
Type: TC
Location: 102833 - 103591 (-)
Gene ID: HRGMv2_2747_4_90
Type: TC
Location: 103604 - 104266 (-)
Gene ID: HRGMv2_2747_4_91
Type: TC
Location: 104338 - 105165 (-)
Gene ID: HRGMv2_2747_4_92
Type: TC
Location: 105392 - 106219 (-)
Gene ID: HRGMv2_2747_4_93
Type: pfam
Location: 106429 - 108147 (-)
Gene ID: HRGMv2_2747_4_94
Type: CAZyme
Location: 108195 - 110750 (-)
Gene ID: HRGMv2_2747_4_95
Type: pfam
Location: 111004 - 111729 (+)
Gene ID: HRGMv2_2747_4_96
Type: pfam
Location: 111780 - 112793 (-)
Gene ID: HRGMv2_2747_4_97
Type: TC
Location: 112984 - 113754 (+)
Gene ID: HRGMv2_2747_4_98
Type: TC
Location: 113758 - 115845 (+)
Gene ID: HRGMv2_2747_4_99
Type: pfam
Location: 116146 - 116823 (+)
Gene ID: HRGMv2_2747_4_100
Type: TC
Location: 117093 - 118199 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2747_4_90 vegetarian > vegan 1.22501 0.00085

🧭 Explore Read Mapping of CGC

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