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Cluster: HRGMv2_2747_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2747_3 HRGMv2_2747_3_17 19092 20900 - 3.A.1.106.3
TC HRGMv2_2747_3 HRGMv2_2747_3_18 20925 22685 - 3.A.1.135.5
TC HRGMv2_2747_3 HRGMv2_2747_3_19 23125 23820 + 1.C.113.1.10
peptidase HRGMv2_2747_3 HRGMv2_2747_3_20 23881 24837 + S33.UPW
NULL(UNKNOWN) HRGMv2_2747_3 HRGMv2_2747_3_21 24943 25272 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2747_3 HRGMv2_2747_3_22 25439 26308 + CE4
pfam HRGMv2_2747_3 HRGMv2_2747_3_23 26388 26927 + Amidase_3
TC HRGMv2_2747_3 HRGMv2_2747_3_24 26924 28237 + 2.A.25.1.4
Gene ID: HRGMv2_2747_3_17
Type: TC
Location: 19092 - 20900 (-)
Gene ID: HRGMv2_2747_3_18
Type: TC
Location: 20925 - 22685 (-)
Gene ID: HRGMv2_2747_3_19
Type: TC
Location: 23125 - 23820 (+)
Gene ID: HRGMv2_2747_3_20
Type: peptidase
Location: 23881 - 24837 (+)
Gene ID: HRGMv2_2747_3_21
Type:
Location: 24943 - 25272 (-)
Gene ID: HRGMv2_2747_3_22
Type: CAZyme
Location: 25439 - 26308 (+)
Gene ID: HRGMv2_2747_3_23
Type: pfam
Location: 26388 - 26927 (+)
Gene ID: HRGMv2_2747_3_24
Type: TC
Location: 26924 - 28237 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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