Cluster: HRGMv2_2747_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2747
- CGC Family ID: CGCFAM_01466
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2747_2 | HRGMv2_2747_2_196 | 186967 | 187854 | - | 3.A.1.5.20 |
| TC | HRGMv2_2747_2 | HRGMv2_2747_2_197 | 187851 | 188843 | - | 3.A.1.5.20 |
| TC | HRGMv2_2747_2 | HRGMv2_2747_2_198 | 188833 | 189735 | - | 3.A.1.5.19 |
| TC | HRGMv2_2747_2 | HRGMv2_2747_2_199 | 189728 | 190741 | - | 3.A.1.5.25 |
| TC | HRGMv2_2747_2 | HRGMv2_2747_2_200 | 190771 | 192360 | - | 3.A.1.5.28 |
| CAZyme | HRGMv2_2747_2 | HRGMv2_2747_2_201 | 192698 | 193801 | + | GH179 |
Gene ID: HRGMv2_2747_2_196
Type: TC
Location: 186967 - 187854 (-)
Type: TC
Location: 186967 - 187854 (-)
Gene ID: HRGMv2_2747_2_197
Type: TC
Location: 187851 - 188843 (-)
Type: TC
Location: 187851 - 188843 (-)
Gene ID: HRGMv2_2747_2_198
Type: TC
Location: 188833 - 189735 (-)
Type: TC
Location: 188833 - 189735 (-)
Gene ID: HRGMv2_2747_2_199
Type: TC
Location: 189728 - 190741 (-)
Type: TC
Location: 189728 - 190741 (-)
Gene ID: HRGMv2_2747_2_200
Type: TC
Location: 190771 - 192360 (-)
Type: TC
Location: 190771 - 192360 (-)
Gene ID: HRGMv2_2747_2_201
Type: CAZyme
Location: 192698 - 193801 (+)
Type: CAZyme
Location: 192698 - 193801 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Hominenteromicrobium
Species
Hominenteromicrobium sp900549945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2747_2_196 | vegetarian > vegan | 1.74365 | 0.00085 |
| HRGMv2_2747_2_199 | vegetarian > vegan | 1.43349 | 0.00085 |
| HRGMv2_2747_2_200 | vegetarian > vegan | 1.55271 | 0.00085 |