Cluster: HRGMv2_2745_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2745
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2745_9 | HRGMv2_2745_9_3 | 3404 | 4741 | + | 2.A.1.2.88 |
| pfam | HRGMv2_2745_9 | HRGMv2_2745_9_4 | 4766 | 5590 | + | GDPD |
| NULL(UNKNOWN) | HRGMv2_2745_9 | HRGMv2_2745_9_5 | 5657 | 6535 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2745_9 | HRGMv2_2745_9_6 | 6528 | 8258 | + | 4.C.1.1.4 |
| CAZyme | HRGMv2_2745_9 | HRGMv2_2745_9_7 | 8888 | 10066 | - | GT1 |
Gene ID: HRGMv2_2745_9_3
Type: TC
Location: 3404 - 4741 (+)
Type: TC
Location: 3404 - 4741 (+)
Gene ID: HRGMv2_2745_9_4
Type: pfam
Location: 4766 - 5590 (+)
Type: pfam
Location: 4766 - 5590 (+)
Gene ID: HRGMv2_2745_9_5
Type:
Location: 5657 - 6535 (+)
Type:
Location: 5657 - 6535 (+)
Gene ID: HRGMv2_2745_9_6
Type: TC
Location: 6528 - 8258 (+)
Type: TC
Location: 6528 - 8258 (+)
Gene ID: HRGMv2_2745_9_7
Type: CAZyme
Location: 8888 - 10066 (-)
Type: CAZyme
Location: 8888 - 10066 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Hominicoprocola
Species
Hominicoprocola sp900550165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2745_9_4 | vegetarian > vegan | 1.33421 | 0.00007 |
| HRGMv2_2745_9_7 | vegetarian > vegan | 1.30379 | 0.00007 |