Cluster: HRGMv2_2745_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2745
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2745_15 | HRGMv2_2745_15_26 | 26037 | 26570 | + | 2.A.87.3.2 |
| TC | HRGMv2_2745_15 | HRGMv2_2745_15_27 | 26563 | 27732 | + | 3.A.24.3.1 |
| pfam | HRGMv2_2745_15 | HRGMv2_2745_15_28 | 27919 | 28935 | - | Gp_dh_N | Gp_dh_C |
| pfam | HRGMv2_2745_15 | HRGMv2_2745_15_29 | 29263 | 30237 | - | PTA_PTB |
| CAZyme | HRGMv2_2745_15 | HRGMv2_2745_15_30 | 30494 | 32215 | + | CBM50 |
Gene ID: HRGMv2_2745_15_26
Type: TC
Location: 26037 - 26570 (+)
Type: TC
Location: 26037 - 26570 (+)
Gene ID: HRGMv2_2745_15_27
Type: TC
Location: 26563 - 27732 (+)
Type: TC
Location: 26563 - 27732 (+)
Gene ID: HRGMv2_2745_15_28
Type: pfam
Location: 27919 - 28935 (-)
Type: pfam
Location: 27919 - 28935 (-)
Gene ID: HRGMv2_2745_15_29
Type: pfam
Location: 29263 - 30237 (-)
Type: pfam
Location: 29263 - 30237 (-)
Gene ID: HRGMv2_2745_15_30
Type: CAZyme
Location: 30494 - 32215 (+)
Type: CAZyme
Location: 30494 - 32215 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Hominicoprocola
Species
Hominicoprocola sp900550165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2745_15_26 | vegetarian > vegan | 1.26612 | 0.00007 |
| HRGMv2_2745_15_30 | vegetarian > vegan | 1.03865 | 0.00007 |