Cluster: HRGMv2_2745_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2745
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2745_11 | HRGMv2_2745_11_88 | 100280 | 101449 | - | 2.A.4.7.4 |
| NULL(UNKNOWN) | HRGMv2_2745_11 | HRGMv2_2745_11_89 | 101460 | 102065 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2745_11 | HRGMv2_2745_11_90 | 102186 | 102566 | - | Ribonuc_L-PSP |
| TC | HRGMv2_2745_11 | HRGMv2_2745_11_91 | 102708 | 103730 | + | 9.A.11.1.1 |
| pfam | HRGMv2_2745_11 | HRGMv2_2745_11_92 | 103734 | 104090 | + | SpoVAC_SpoVAEB |
| CAZyme | HRGMv2_2745_11 | HRGMv2_2745_11_93 | 104135 | 105394 | - | GT2 |
Gene ID: HRGMv2_2745_11_88
Type: TC
Location: 100280 - 101449 (-)
Type: TC
Location: 100280 - 101449 (-)
Gene ID: HRGMv2_2745_11_89
Type:
Location: 101460 - 102065 (-)
Type:
Location: 101460 - 102065 (-)
Gene ID: HRGMv2_2745_11_90
Type: pfam
Location: 102186 - 102566 (-)
Type: pfam
Location: 102186 - 102566 (-)
Gene ID: HRGMv2_2745_11_91
Type: TC
Location: 102708 - 103730 (+)
Type: TC
Location: 102708 - 103730 (+)
Gene ID: HRGMv2_2745_11_92
Type: pfam
Location: 103734 - 104090 (+)
Type: pfam
Location: 103734 - 104090 (+)
Gene ID: HRGMv2_2745_11_93
Type: CAZyme
Location: 104135 - 105394 (-)
Type: CAZyme
Location: 104135 - 105394 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Hominicoprocola
Species
Hominicoprocola sp900550165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2745_11_88 | vegetarian > vegan | 1.10805 | 0.00007 |
| HRGMv2_2745_11_89 | vegetarian > vegan | 1.34726 | 0.00007 |
| HRGMv2_2745_11_92 | vegetarian > vegan | 1.08082 | 0.00007 |