dbCAN Logo

Cluster: HRGMv2_2740_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2740_1 HRGMv2_2740_1_180 181636 182400 - GT2
TC HRGMv2_2740_1 HRGMv2_2740_1_181 182453 183127 - 9.B.18.1.3
pfam HRGMv2_2740_1 HRGMv2_2740_1_182 183477 183887 + GtrA_DPMS_TM
CAZyme HRGMv2_2740_1 HRGMv2_2740_1_183 183911 184873 + GT2
pfam HRGMv2_2740_1 HRGMv2_2740_1_184 185143 186264 + Glyphos_transf
pfam HRGMv2_2740_1 HRGMv2_2740_1_185 186284 187066 + ABC2_membrane
TC HRGMv2_2740_1 HRGMv2_2740_1_186 187063 187944 + 3.A.1.103.4
Gene ID: HRGMv2_2740_1_180
Type: CAZyme
Location: 181636 - 182400 (-)
Gene ID: HRGMv2_2740_1_181
Type: TC
Location: 182453 - 183127 (-)
Gene ID: HRGMv2_2740_1_182
Type: pfam
Location: 183477 - 183887 (+)
Gene ID: HRGMv2_2740_1_183
Type: CAZyme
Location: 183911 - 184873 (+)
Gene ID: HRGMv2_2740_1_184
Type: pfam
Location: 185143 - 186264 (+)
Gene ID: HRGMv2_2740_1_185
Type: pfam
Location: 186284 - 187066 (+)
Gene ID: HRGMv2_2740_1_186
Type: TC
Location: 187063 - 187944 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List