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Cluster: HRGMv2_2740_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2740_13 HRGMv2_2740_13_13 9433 10095 - 4.B.1.1.2
TC HRGMv2_2740_13 HRGMv2_2740_13_14 10292 11659 - 2.A.22.5.3
pfam HRGMv2_2740_13 HRGMv2_2740_13_15 11840 13087 - MoCF_biosynth | CinA | CinA_KH
pfam HRGMv2_2740_13 HRGMv2_2740_13_16 13147 14331 - ThiI | THUMP | ThiI_fer
CAZyme HRGMv2_2740_13 HRGMv2_2740_13_17 14391 16682 - GT28
pfam HRGMv2_2740_13 HRGMv2_2740_13_18 16924 18312 + VanW | PG_binding_4
NULL(UNKNOWN) HRGMv2_2740_13 HRGMv2_2740_13_19 18442 19047 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2740_13 HRGMv2_2740_13_20 19156 20112 + GT2
Gene ID: HRGMv2_2740_13_13
Type: TC
Location: 9433 - 10095 (-)
Gene ID: HRGMv2_2740_13_14
Type: TC
Location: 10292 - 11659 (-)
Gene ID: HRGMv2_2740_13_15
Type: pfam
Location: 11840 - 13087 (-)
Gene ID: HRGMv2_2740_13_16
Type: pfam
Location: 13147 - 14331 (-)
Gene ID: HRGMv2_2740_13_17
Type: CAZyme
Location: 14391 - 16682 (-)
Gene ID: HRGMv2_2740_13_18
Type: pfam
Location: 16924 - 18312 (+)
Gene ID: HRGMv2_2740_13_19
Type:
Location: 18442 - 19047 (+)
Gene ID: HRGMv2_2740_13_20
Type: CAZyme
Location: 19156 - 20112 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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