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Cluster: HRGMv2_2740_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2740_1 HRGMv2_2740_1_117 117228 118655 + 2.A.114.1.4
pfam HRGMv2_2740_1 HRGMv2_2740_1_118 118714 119454 - PCMT | UPF0020 | Ubie_methyltran | FtsJ | TehB | MTS | PrmA | MetW | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_32 | Methyltransf_31
TC HRGMv2_2740_1 HRGMv2_2740_1_119 119512 120933 - 2.A.66.1.33
NULL(UNKNOWN) HRGMv2_2740_1 HRGMv2_2740_1_120 121182 121709 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2740_1 HRGMv2_2740_1_121 121721 123274 - Carb_kinase | YjeF_N
CAZyme HRGMv2_2740_1 HRGMv2_2740_1_122 123285 124790 - GH77
Gene ID: HRGMv2_2740_1_117
Type: TC
Location: 117228 - 118655 (+)
Gene ID: HRGMv2_2740_1_118
Type: pfam
Location: 118714 - 119454 (-)
Gene ID: HRGMv2_2740_1_119
Type: TC
Location: 119512 - 120933 (-)
Gene ID: HRGMv2_2740_1_120
Type:
Location: 121182 - 121709 (-)
Gene ID: HRGMv2_2740_1_121
Type: pfam
Location: 121721 - 123274 (-)
Gene ID: HRGMv2_2740_1_122
Type: CAZyme
Location: 123285 - 124790 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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