Cluster: HRGMv2_2739_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2739
- CGC Family ID: CGCFAM_00010
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2739_8 | HRGMv2_2739_8_22 | 19285 | 20745 | - | GH77 |
| TF | HRGMv2_2739_8 | HRGMv2_2739_8_23 | 20787 | 21812 | - | LacI |
| TC | HRGMv2_2739_8 | HRGMv2_2739_8_24 | 21820 | 22704 | - | 3.A.1.1.45 |
| TC | HRGMv2_2739_8 | HRGMv2_2739_8_25 | 22704 | 23621 | - | 3.A.1.1.45 |
| TC | HRGMv2_2739_8 | HRGMv2_2739_8_26 | 23858 | 25156 | - | 3.A.1.1.45 |
| TC | HRGMv2_2739_8 | HRGMv2_2739_8_27 | 25465 | 28239 | + | 3.A.3.5.15 |
Gene ID: HRGMv2_2739_8_22
Type: CAZyme
Location: 19285 - 20745 (-)
Type: CAZyme
Location: 19285 - 20745 (-)
Gene ID: HRGMv2_2739_8_23
Type: TF
Location: 20787 - 21812 (-)
Type: TF
Location: 20787 - 21812 (-)
Gene ID: HRGMv2_2739_8_24
Type: TC
Location: 21820 - 22704 (-)
Type: TC
Location: 21820 - 22704 (-)
Gene ID: HRGMv2_2739_8_25
Type: TC
Location: 22704 - 23621 (-)
Type: TC
Location: 22704 - 23621 (-)
Gene ID: HRGMv2_2739_8_26
Type: TC
Location: 23858 - 25156 (-)
Type: TC
Location: 23858 - 25156 (-)
Gene ID: HRGMv2_2739_8_27
Type: TC
Location: 25465 - 28239 (+)
Type: TC
Location: 25465 - 28239 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Angelakisella
Species
Angelakisella sp900547385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.