Cluster: HRGMv2_2739_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2739
- CGC Family ID: CGCFAM_10169
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2739_2 | HRGMv2_2739_2_168 | 174877 | 175371 | + | 3.D.1.5.1 |
| NULL(UNKNOWN) | HRGMv2_2739_2 | HRGMv2_2739_2_169 | 175392 | 175763 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2739_2 | HRGMv2_2739_2_170 | 175779 | 177575 | + | 3.D.1.5.1 |
| STP | HRGMv2_2739_2 | HRGMv2_2739_2_171 | 177593 | 179335 | + | Fer4 | Fer4 |
| CAZyme | HRGMv2_2739_2 | HRGMv2_2739_2_172 | 180005 | 181330 | - | CBM50 |
| TC | HRGMv2_2739_2 | HRGMv2_2739_2_173 | 181921 | 182280 | + | 3.A.1.31.2 |
Gene ID: HRGMv2_2739_2_168
Type: TC
Location: 174877 - 175371 (+)
Type: TC
Location: 174877 - 175371 (+)
Gene ID: HRGMv2_2739_2_169
Type:
Location: 175392 - 175763 (+)
Type:
Location: 175392 - 175763 (+)
Gene ID: HRGMv2_2739_2_170
Type: TC
Location: 175779 - 177575 (+)
Type: TC
Location: 175779 - 177575 (+)
Gene ID: HRGMv2_2739_2_171
Type: STP
Location: 177593 - 179335 (+)
Type: STP
Location: 177593 - 179335 (+)
Gene ID: HRGMv2_2739_2_172
Type: CAZyme
Location: 180005 - 181330 (-)
Type: CAZyme
Location: 180005 - 181330 (-)
Gene ID: HRGMv2_2739_2_173
Type: TC
Location: 181921 - 182280 (+)
Type: TC
Location: 181921 - 182280 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Angelakisella
Species
Angelakisella sp900547385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.