Cluster: HRGMv2_2737_CGC6
🧬 Cluster Details
- Gene Count: 34
- CAZyme Count: 8
- Substrate:
- Genome ID: HRGMv2_2737
- CGC Family ID: CGCFAM_10168
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2737_2 | HRGMv2_2737_2_281 | 310098 | 310889 | + | 3.A.2.1.5 |
| TC | HRGMv2_2737_2 | HRGMv2_2737_2_282 | 310939 | 311166 | + | 3.A.2.1.5 |
| pfam | HRGMv2_2737_2 | HRGMv2_2737_2_283 | 311215 | 311700 | + | ATP-synt_B | Mt_ATP-synt_B |
| TC | HRGMv2_2737_2 | HRGMv2_2737_2_284 | 311700 | 313721 | + | 3.A.2.1.6 |
| TC | HRGMv2_2737_2 | HRGMv2_2737_2_285 | 313714 | 314598 | + | 3.A.2.1.5 |
| TC | HRGMv2_2737_2 | HRGMv2_2737_2_286 | 314611 | 315996 | + | 3.A.2.1.5 |
| TC | HRGMv2_2737_2 | HRGMv2_2737_2_287 | 315996 | 316409 | + | 3.A.2.1.5 |
| pfam | HRGMv2_2737_2 | HRGMv2_2737_2_288 | 316559 | 317830 | + | Hydrolase | 2-thiour_desulf | Hydrolase_3 |
| NULL(UNKNOWN) | HRGMv2_2737_2 | HRGMv2_2737_2_289 | 317958 | 318521 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2737_2 | HRGMv2_2737_2_290 | 318729 | 320051 | + | 3.D.6.1.2 |
| TC | HRGMv2_2737_2 | HRGMv2_2737_2_291 | 320066 | 321007 | + | 3.D.6.1.2 |
| TC | HRGMv2_2737_2 | HRGMv2_2737_2_292 | 321010 | 321636 | + | 3.D.6.1.2 |
| TC | HRGMv2_2737_2 | HRGMv2_2737_2_293 | 321640 | 322326 | + | 3.D.6.1.2 |
| TC | HRGMv2_2737_2 | HRGMv2_2737_2_294 | 322319 | 322897 | + | 3.D.6.1.2 |
| TC | HRGMv2_2737_2 | HRGMv2_2737_2_295 | 322910 | 323710 | + | 3.D.6.1.1 |
| pfam | HRGMv2_2737_2 | HRGMv2_2737_2_296 | 323783 | 324811 | + | ApbE |
| pfam | HRGMv2_2737_2 | HRGMv2_2737_2_297 | 324808 | 325191 | + | NusG_II |
| TC | HRGMv2_2737_2 | HRGMv2_2737_2_298 | 325188 | 325706 | + | 2.A.87.3.2 |
| pfam | HRGMv2_2737_2 | HRGMv2_2737_2_299 | 325707 | 326246 | + | Hexapep | Hexapep | Hexapep_2 | Hexapep_2 |
| TC | HRGMv2_2737_2 | HRGMv2_2737_2_300 | 326459 | 327163 | + | 9.B.18.1.3 |
| TC | HRGMv2_2737_2 | HRGMv2_2737_2_301 | 327173 | 328120 | + | 8.A.5.1.4 |
| pfam | HRGMv2_2737_2 | HRGMv2_2737_2_302 | 328213 | 329010 | + | Transketolase_N | E1_dh | DXP_synthase_N |
| pfam | HRGMv2_2737_2 | HRGMv2_2737_2_303 | 329070 | 329993 | + | Transket_pyr | Transketolase_C |
| CAZyme | HRGMv2_2737_2 | HRGMv2_2737_2_304 | 329995 | 331155 | + | GT4 |
| CAZyme | HRGMv2_2737_2 | HRGMv2_2737_2_305 | 331152 | 332243 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_2737_2 | HRGMv2_2737_2_306 | 332370 | 333560 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2737_2 | HRGMv2_2737_2_307 | 333612 | 334571 | + | GT2 |
| CAZyme | HRGMv2_2737_2 | HRGMv2_2737_2_308 | 334577 | 335533 | + | GT2 |
| pfam | HRGMv2_2737_2 | HRGMv2_2737_2_309 | 335561 | 337135 | + | Polysacc_synt | Polysacc_synt_3 |
| pfam | HRGMv2_2737_2 | HRGMv2_2737_2_310 | 337128 | 338261 | + | Glyphos_transf |
| CAZyme | HRGMv2_2737_2 | HRGMv2_2737_2_311 | 338281 | 339156 | + | GT14 |
| CAZyme | HRGMv2_2737_2 | HRGMv2_2737_2_312 | 339235 | 340230 | - | GT2 |
| CAZyme | HRGMv2_2737_2 | HRGMv2_2737_2_313 | 340234 | 341346 | - | GT4 |
| CAZyme | HRGMv2_2737_2 | HRGMv2_2737_2_314 | 341346 | 342332 | - | GT2 |
Gene ID: HRGMv2_2737_2_281
Type: TC
Location: 310098 - 310889 (+)
Type: TC
Location: 310098 - 310889 (+)
Gene ID: HRGMv2_2737_2_282
Type: TC
Location: 310939 - 311166 (+)
Type: TC
Location: 310939 - 311166 (+)
Gene ID: HRGMv2_2737_2_283
Type: pfam
Location: 311215 - 311700 (+)
Type: pfam
Location: 311215 - 311700 (+)
Gene ID: HRGMv2_2737_2_284
Type: TC
Location: 311700 - 313721 (+)
Type: TC
Location: 311700 - 313721 (+)
Gene ID: HRGMv2_2737_2_285
Type: TC
Location: 313714 - 314598 (+)
Type: TC
Location: 313714 - 314598 (+)
Gene ID: HRGMv2_2737_2_286
Type: TC
Location: 314611 - 315996 (+)
Type: TC
Location: 314611 - 315996 (+)
Gene ID: HRGMv2_2737_2_287
Type: TC
Location: 315996 - 316409 (+)
Type: TC
Location: 315996 - 316409 (+)
Gene ID: HRGMv2_2737_2_288
Type: pfam
Location: 316559 - 317830 (+)
Type: pfam
Location: 316559 - 317830 (+)
Gene ID: HRGMv2_2737_2_289
Type:
Location: 317958 - 318521 (+)
Type:
Location: 317958 - 318521 (+)
Gene ID: HRGMv2_2737_2_290
Type: TC
Location: 318729 - 320051 (+)
Type: TC
Location: 318729 - 320051 (+)
Gene ID: HRGMv2_2737_2_291
Type: TC
Location: 320066 - 321007 (+)
Type: TC
Location: 320066 - 321007 (+)
Gene ID: HRGMv2_2737_2_292
Type: TC
Location: 321010 - 321636 (+)
Type: TC
Location: 321010 - 321636 (+)
Gene ID: HRGMv2_2737_2_293
Type: TC
Location: 321640 - 322326 (+)
Type: TC
Location: 321640 - 322326 (+)
Gene ID: HRGMv2_2737_2_294
Type: TC
Location: 322319 - 322897 (+)
Type: TC
Location: 322319 - 322897 (+)
Gene ID: HRGMv2_2737_2_295
Type: TC
Location: 322910 - 323710 (+)
Type: TC
Location: 322910 - 323710 (+)
Gene ID: HRGMv2_2737_2_296
Type: pfam
Location: 323783 - 324811 (+)
Type: pfam
Location: 323783 - 324811 (+)
Gene ID: HRGMv2_2737_2_297
Type: pfam
Location: 324808 - 325191 (+)
Type: pfam
Location: 324808 - 325191 (+)
Gene ID: HRGMv2_2737_2_298
Type: TC
Location: 325188 - 325706 (+)
Type: TC
Location: 325188 - 325706 (+)
Gene ID: HRGMv2_2737_2_299
Type: pfam
Location: 325707 - 326246 (+)
Type: pfam
Location: 325707 - 326246 (+)
Gene ID: HRGMv2_2737_2_300
Type: TC
Location: 326459 - 327163 (+)
Type: TC
Location: 326459 - 327163 (+)
Gene ID: HRGMv2_2737_2_301
Type: TC
Location: 327173 - 328120 (+)
Type: TC
Location: 327173 - 328120 (+)
Gene ID: HRGMv2_2737_2_302
Type: pfam
Location: 328213 - 329010 (+)
Type: pfam
Location: 328213 - 329010 (+)
Gene ID: HRGMv2_2737_2_303
Type: pfam
Location: 329070 - 329993 (+)
Type: pfam
Location: 329070 - 329993 (+)
Gene ID: HRGMv2_2737_2_304
Type: CAZyme
Location: 329995 - 331155 (+)
Type: CAZyme
Location: 329995 - 331155 (+)
Gene ID: HRGMv2_2737_2_305
Type: CAZyme
Location: 331152 - 332243 (+)
Type: CAZyme
Location: 331152 - 332243 (+)
Gene ID: HRGMv2_2737_2_306
Type:
Location: 332370 - 333560 (+)
Type:
Location: 332370 - 333560 (+)
Gene ID: HRGMv2_2737_2_307
Type: CAZyme
Location: 333612 - 334571 (+)
Type: CAZyme
Location: 333612 - 334571 (+)
Gene ID: HRGMv2_2737_2_308
Type: CAZyme
Location: 334577 - 335533 (+)
Type: CAZyme
Location: 334577 - 335533 (+)
Gene ID: HRGMv2_2737_2_309
Type: pfam
Location: 335561 - 337135 (+)
Type: pfam
Location: 335561 - 337135 (+)
Gene ID: HRGMv2_2737_2_310
Type: pfam
Location: 337128 - 338261 (+)
Type: pfam
Location: 337128 - 338261 (+)
Gene ID: HRGMv2_2737_2_311
Type: CAZyme
Location: 338281 - 339156 (+)
Type: CAZyme
Location: 338281 - 339156 (+)
Gene ID: HRGMv2_2737_2_312
Type: CAZyme
Location: 339235 - 340230 (-)
Type: CAZyme
Location: 339235 - 340230 (-)
Gene ID: HRGMv2_2737_2_313
Type: CAZyme
Location: 340234 - 341346 (-)
Type: CAZyme
Location: 340234 - 341346 (-)
Gene ID: HRGMv2_2737_2_314
Type: CAZyme
Location: 341346 - 342332 (-)
Type: CAZyme
Location: 341346 - 342332 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp000433975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.