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Cluster: HRGMv2_2737_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2737_6 HRGMv2_2737_6_54 58032 59243 - GT4
pfam HRGMv2_2737_6 HRGMv2_2737_6_55 59240 60268 - Acyl_transf_3
CAZyme HRGMv2_2737_6 HRGMv2_2737_6_56 60313 61446 - GT4
CAZyme HRGMv2_2737_6 HRGMv2_2737_6_57 61447 62562 - GT4
TC HRGMv2_2737_6 HRGMv2_2737_6_58 62639 64111 - 9.B.18.1.2
TC HRGMv2_2737_6 HRGMv2_2737_6_59 64148 64906 - 8.A.3.2.1
TC HRGMv2_2737_6 HRGMv2_2737_6_60 64906 65661 - 8.A.3.2.3
Gene ID: HRGMv2_2737_6_54
Type: CAZyme
Location: 58032 - 59243 (-)
Gene ID: HRGMv2_2737_6_55
Type: pfam
Location: 59240 - 60268 (-)
Gene ID: HRGMv2_2737_6_56
Type: CAZyme
Location: 60313 - 61446 (-)
Gene ID: HRGMv2_2737_6_57
Type: CAZyme
Location: 61447 - 62562 (-)
Gene ID: HRGMv2_2737_6_58
Type: TC
Location: 62639 - 64111 (-)
Gene ID: HRGMv2_2737_6_59
Type: TC
Location: 64148 - 64906 (-)
Gene ID: HRGMv2_2737_6_60
Type: TC
Location: 64906 - 65661 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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