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Cluster: HRGMv2_2737_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2737_5 HRGMv2_2737_5_57 59499 60875 + 1.A.26.1.2
TC HRGMv2_2737_5 HRGMv2_2737_5_58 61012 62427 - 2.A.25.1.5
CAZyme HRGMv2_2737_5 HRGMv2_2737_5_59 62609 64060 - GH33
TC HRGMv2_2737_5 HRGMv2_2737_5_60 64175 65662 - 2.A.22.5.3
NULL(UNKNOWN) HRGMv2_2737_5 HRGMv2_2737_5_61 65934 66386 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2737_5 HRGMv2_2737_5_62 66346 67635 + GH136
CAZyme HRGMv2_2737_5 HRGMv2_2737_5_63 67658 69847 + GH112
TC HRGMv2_2737_5 HRGMv2_2737_5_64 70365 71078 + 2.A.78.1.1
TC HRGMv2_2737_5 HRGMv2_2737_5_65 71075 71404 + 2.A.78.1.1
Gene ID: HRGMv2_2737_5_57
Type: TC
Location: 59499 - 60875 (+)
Gene ID: HRGMv2_2737_5_58
Type: TC
Location: 61012 - 62427 (-)
Gene ID: HRGMv2_2737_5_59
Type: CAZyme
Location: 62609 - 64060 (-)
Gene ID: HRGMv2_2737_5_60
Type: TC
Location: 64175 - 65662 (-)
Gene ID: HRGMv2_2737_5_61
Type:
Location: 65934 - 66386 (+)
Gene ID: HRGMv2_2737_5_62
Type: CAZyme
Location: 66346 - 67635 (+)
Gene ID: HRGMv2_2737_5_63
Type: CAZyme
Location: 67658 - 69847 (+)
Gene ID: HRGMv2_2737_5_64
Type: TC
Location: 70365 - 71078 (+)
Gene ID: HRGMv2_2737_5_65
Type: TC
Location: 71075 - 71404 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2737_5_57 vegetarian > omnivore 1.84688 0.02628

🧭 Explore Read Mapping of CGC

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