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Cluster: HRGMv2_2737_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2737_3 HRGMv2_2737_3_789 862202 862984 - 3.A.1.3.28
TC HRGMv2_2737_3 HRGMv2_2737_3_790 862990 863658 - 3.A.1.3.14
TC HRGMv2_2737_3 HRGMv2_2737_3_791 863761 864555 - 3.A.1.3.2
pfam HRGMv2_2737_3 HRGMv2_2737_3_792 864716 865615 - AP_endonuc_2
pfam HRGMv2_2737_3 HRGMv2_2737_3_793 865644 867497 - TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N
CAZyme HRGMv2_2737_3 HRGMv2_2737_3_794 867500 868513 - GH177
CAZyme HRGMv2_2737_3 HRGMv2_2737_3_795 868810 871149 + GH36
Gene ID: HRGMv2_2737_3_789
Type: TC
Location: 862202 - 862984 (-)
Gene ID: HRGMv2_2737_3_790
Type: TC
Location: 862990 - 863658 (-)
Gene ID: HRGMv2_2737_3_791
Type: TC
Location: 863761 - 864555 (-)
Gene ID: HRGMv2_2737_3_792
Type: pfam
Location: 864716 - 865615 (-)
Gene ID: HRGMv2_2737_3_793
Type: pfam
Location: 865644 - 867497 (-)
Gene ID: HRGMv2_2737_3_794
Type: CAZyme
Location: 867500 - 868513 (-)
Gene ID: HRGMv2_2737_3_795
Type: CAZyme
Location: 868810 - 871149 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2737_3_793 vegetarian > omnivore 1.39679 0.02628

🧭 Explore Read Mapping of CGC

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