Cluster: HRGMv2_2733_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2733
- CGC Family ID: CGCFAM_02483
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2733_1 | HRGMv2_2733_1_2103 | 2189165 | 2190451 | - | 2.A.115.2.14 |
| TF | HRGMv2_2733_1 | HRGMv2_2733_1_2104 | 2190453 | 2190866 | - | MarR |
| CAZyme | HRGMv2_2733_1 | HRGMv2_2733_1_2105 | 2191344 | 2194478 | - | GH13_14 |
| CAZyme | HRGMv2_2733_1 | HRGMv2_2733_1_2106 | 2194528 | 2197362 | - | GH13_14 |
Gene ID: HRGMv2_2733_1_2103
Type: TC
Location: 2189165 - 2190451 (-)
Type: TC
Location: 2189165 - 2190451 (-)
Gene ID: HRGMv2_2733_1_2104
Type: TF
Location: 2190453 - 2190866 (-)
Type: TF
Location: 2190453 - 2190866 (-)
Gene ID: HRGMv2_2733_1_2105
Type: CAZyme
Location: 2191344 - 2194478 (-)
Type: CAZyme
Location: 2191344 - 2194478 (-)
Gene ID: HRGMv2_2733_1_2106
Type: CAZyme
Location: 2194528 - 2197362 (-)
Type: CAZyme
Location: 2194528 - 2197362 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp934476515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.