Cluster: HRGMv2_2733_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2733
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2733_1 | HRGMv2_2733_1_1540 | 1604031 | 1604804 | + | 3.A.1.3.15 |
| TC | HRGMv2_2733_1 | HRGMv2_2733_1_1541 | 1604948 | 1605610 | + | 3.A.1.3.12 |
| TC | HRGMv2_2733_1 | HRGMv2_2733_1_1542 | 1605600 | 1606343 | + | 3.A.1.3.25 |
| NULL(UNKNOWN) | HRGMv2_2733_1 | HRGMv2_2733_1_1543 | 1606593 | 1606826 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2733_1 | HRGMv2_2733_1_1544 | 1606819 | 1607109 | + | Sigma70_r4_2 |
| CAZyme | HRGMv2_2733_1 | HRGMv2_2733_1_1545 | 1607290 | 1609521 | + | GH13_28 |
Gene ID: HRGMv2_2733_1_1540
Type: TC
Location: 1604031 - 1604804 (+)
Type: TC
Location: 1604031 - 1604804 (+)
Gene ID: HRGMv2_2733_1_1541
Type: TC
Location: 1604948 - 1605610 (+)
Type: TC
Location: 1604948 - 1605610 (+)
Gene ID: HRGMv2_2733_1_1542
Type: TC
Location: 1605600 - 1606343 (+)
Type: TC
Location: 1605600 - 1606343 (+)
Gene ID: HRGMv2_2733_1_1543
Type:
Location: 1606593 - 1606826 (+)
Type:
Location: 1606593 - 1606826 (+)
Gene ID: HRGMv2_2733_1_1544
Type: STP
Location: 1606819 - 1607109 (+)
Type: STP
Location: 1606819 - 1607109 (+)
Gene ID: HRGMv2_2733_1_1545
Type: CAZyme
Location: 1607290 - 1609521 (+)
Type: CAZyme
Location: 1607290 - 1609521 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp934476515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.