Cluster: HRGMv2_2733_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2733
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2733_1 | HRGMv2_2733_1_2410 | 2510320 | 2512065 | + | 2.A.25.1.9 |
| STP | HRGMv2_2733_1 | HRGMv2_2733_1_2411 | 2512628 | 2513602 | + | HTH_7 |
| TC | HRGMv2_2733_1 | HRGMv2_2733_1_2412 | 2514216 | 2514680 | - | 9.A.24.1.7 |
| pfam | HRGMv2_2733_1 | HRGMv2_2733_1_2413 | 2514814 | 2516163 | + | Abhydrolase_1 | DUF676 | PGAP1 |
| CAZyme | HRGMv2_2733_1 | HRGMv2_2733_1_2414 | 2516175 | 2517920 | + | CBM34 | GH13_20 |
Gene ID: HRGMv2_2733_1_2410
Type: TC
Location: 2510320 - 2512065 (+)
Type: TC
Location: 2510320 - 2512065 (+)
Gene ID: HRGMv2_2733_1_2411
Type: STP
Location: 2512628 - 2513602 (+)
Type: STP
Location: 2512628 - 2513602 (+)
Gene ID: HRGMv2_2733_1_2412
Type: TC
Location: 2514216 - 2514680 (-)
Type: TC
Location: 2514216 - 2514680 (-)
Gene ID: HRGMv2_2733_1_2413
Type: pfam
Location: 2514814 - 2516163 (+)
Type: pfam
Location: 2514814 - 2516163 (+)
Gene ID: HRGMv2_2733_1_2414
Type: CAZyme
Location: 2516175 - 2517920 (+)
Type: CAZyme
Location: 2516175 - 2517920 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp934476515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.