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Cluster: HRGMv2_2733_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2733_1 HRGMv2_2733_1_2145 2239934 2241325 - 3.A.2.1.5
TC HRGMv2_2733_1 HRGMv2_2733_1_2146 2241359 2242264 - 3.A.2.1.5
TC HRGMv2_2733_1 HRGMv2_2733_1_2147 2242278 2243783 - 3.A.2.1.5
pfam HRGMv2_2733_1 HRGMv2_2733_1_2148 2243790 2244293 - OSCP
pfam HRGMv2_2733_1 HRGMv2_2733_1_2149 2244293 2244772 - ATP-synt_B
TC HRGMv2_2733_1 HRGMv2_2733_1_2150 2244790 2245953 - 3.A.2.1.5
TC HRGMv2_2733_1 HRGMv2_2733_1_2151 2245985 2246677 - 3.A.2.1.5
pfam HRGMv2_2733_1 HRGMv2_2733_1_2152 2247160 2248290 - Aldo_ket_red | Fer4_9
TC HRGMv2_2733_1 HRGMv2_2733_1_2153 2248367 2249188 - 1.A.23.2.1
NULL(UNKNOWN) HRGMv2_2733_1 HRGMv2_2733_1_2154 2249201 2249398 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2733_1 HRGMv2_2733_1_2155 2249435 2250724 - GH13_20
NULL(UNKNOWN) HRGMv2_2733_1 HRGMv2_2733_1_2156 2250943 2251428 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2733_1 HRGMv2_2733_1_2157 2251488 2252207 - 2.A.88.8.3
NULL(UNKNOWN) HRGMv2_2733_1 HRGMv2_2733_1_2158 2252200 2252925 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2733_1 HRGMv2_2733_1_2159 2253166 2254560 - 2.A.40.7.6
CAZyme HRGMv2_2733_1 HRGMv2_2733_1_2160 2254837 2255937 + CE1
Gene ID: HRGMv2_2733_1_2145
Type: TC
Location: 2239934 - 2241325 (-)
Gene ID: HRGMv2_2733_1_2146
Type: TC
Location: 2241359 - 2242264 (-)
Gene ID: HRGMv2_2733_1_2147
Type: TC
Location: 2242278 - 2243783 (-)
Gene ID: HRGMv2_2733_1_2148
Type: pfam
Location: 2243790 - 2244293 (-)
Gene ID: HRGMv2_2733_1_2149
Type: pfam
Location: 2244293 - 2244772 (-)
Gene ID: HRGMv2_2733_1_2150
Type: TC
Location: 2244790 - 2245953 (-)
Gene ID: HRGMv2_2733_1_2151
Type: TC
Location: 2245985 - 2246677 (-)
Gene ID: HRGMv2_2733_1_2152
Type: pfam
Location: 2247160 - 2248290 (-)
Gene ID: HRGMv2_2733_1_2153
Type: TC
Location: 2248367 - 2249188 (-)
Gene ID: HRGMv2_2733_1_2154
Type:
Location: 2249201 - 2249398 (-)
Gene ID: HRGMv2_2733_1_2155
Type: CAZyme
Location: 2249435 - 2250724 (-)
Gene ID: HRGMv2_2733_1_2156
Type:
Location: 2250943 - 2251428 (+)
Gene ID: HRGMv2_2733_1_2157
Type: TC
Location: 2251488 - 2252207 (-)
Gene ID: HRGMv2_2733_1_2158
Type:
Location: 2252200 - 2252925 (-)
Gene ID: HRGMv2_2733_1_2159
Type: TC
Location: 2253166 - 2254560 (-)
Gene ID: HRGMv2_2733_1_2160
Type: CAZyme
Location: 2254837 - 2255937 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2733_1_2148 vegan > omnivore 18.81832 0.00224
HRGMv2_2733_1_2159 vegan > omnivore 1.00953 0.00224

🧭 Explore Read Mapping of CGC

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