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Cluster: HRGMv2_2728_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2728_1 HRGMv2_2728_1_133 146707 148344 - 4.C.1.1.4
NULL(UNKNOWN) HRGMv2_2728_1 HRGMv2_2728_1_134 148514 149284 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2728_1 HRGMv2_2728_1_135 149281 149799 - Sigma70_r2 | Sigma70_r4_2
CAZyme HRGMv2_2728_1 HRGMv2_2728_1_136 149910 151094 - GT28
pfam HRGMv2_2728_1 HRGMv2_2728_1_137 151350 152732 + Mur_ligase | Mur_ligase_C | Mur_ligase_M
TC HRGMv2_2728_1 HRGMv2_2728_1_138 152783 153802 - 1.A.33.1.5
STP HRGMv2_2728_1 HRGMv2_2728_1_139 153904 154533 - Pribosyltran
TC HRGMv2_2728_1 HRGMv2_2728_1_140 154537 156801 - 3.A.7.16.1
Gene ID: HRGMv2_2728_1_133
Type: TC
Location: 146707 - 148344 (-)
Gene ID: HRGMv2_2728_1_134
Type:
Location: 148514 - 149284 (-)
Gene ID: HRGMv2_2728_1_135
Type: STP
Location: 149281 - 149799 (-)
Gene ID: HRGMv2_2728_1_136
Type: CAZyme
Location: 149910 - 151094 (-)
Gene ID: HRGMv2_2728_1_137
Type: pfam
Location: 151350 - 152732 (+)
Gene ID: HRGMv2_2728_1_138
Type: TC
Location: 152783 - 153802 (-)
Gene ID: HRGMv2_2728_1_139
Type: STP
Location: 153904 - 154533 (-)
Gene ID: HRGMv2_2728_1_140
Type: TC
Location: 154537 - 156801 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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