Cluster: HRGMv2_2728_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2728
- CGC Family ID: CGCFAM_00063
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2728_73 | HRGMv2_2728_73_1 | 2 | 1246 | - | GT35 |
| TF | HRGMv2_2728_73 | HRGMv2_2728_73_2 | 1376 | 2233 | + | HTH_AraC | HTH_AraC |
| TF | HRGMv2_2728_73 | HRGMv2_2728_73_3 | 2292 | 3317 | - | LacI |
| TC | HRGMv2_2728_73 | HRGMv2_2728_73_4 | 3605 | 5797 | + | 4.A.1.1.11 |
| pfam | HRGMv2_2728_73 | HRGMv2_2728_73_5 | 5804 | 6622 | + | Exo_endo_phos |
| CAZyme | HRGMv2_2728_73 | HRGMv2_2728_73_6 | 6639 | 8141 | + | GH77 |
Gene ID: HRGMv2_2728_73_1
Type: CAZyme
Location: 2 - 1246 (-)
Type: CAZyme
Location: 2 - 1246 (-)
Gene ID: HRGMv2_2728_73_2
Type: TF
Location: 1376 - 2233 (+)
Type: TF
Location: 1376 - 2233 (+)
Gene ID: HRGMv2_2728_73_3
Type: TF
Location: 2292 - 3317 (-)
Type: TF
Location: 2292 - 3317 (-)
Gene ID: HRGMv2_2728_73_4
Type: TC
Location: 3605 - 5797 (+)
Type: TC
Location: 3605 - 5797 (+)
Gene ID: HRGMv2_2728_73_5
Type: pfam
Location: 5804 - 6622 (+)
Type: pfam
Location: 5804 - 6622 (+)
Gene ID: HRGMv2_2728_73_6
Type: CAZyme
Location: 6639 - 8141 (+)
Type: CAZyme
Location: 6639 - 8141 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Butyricicoccus_A
Species
Butyricicoccus_A intestinisimiae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.