Cluster: HRGMv2_2728_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2728
- CGC Family ID: CGCFAM_03274
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2728_1 | HRGMv2_2728_1_121 | 132924 | 134315 | + | 2.A.38.1.1 |
| TC | HRGMv2_2728_1 | HRGMv2_2728_1_122 | 134325 | 135827 | + | 2.A.38.1.1 |
| pfam | HRGMv2_2728_1 | HRGMv2_2728_1_123 | 135879 | 136769 | - | AP_endonuc_2 |
| CAZyme | HRGMv2_2728_1 | HRGMv2_2728_1_124 | 136782 | 137909 | - | GH109 |
| TF | HRGMv2_2728_1 | HRGMv2_2728_1_125 | 138102 | 138950 | + | HTH_AraC |
| TC | HRGMv2_2728_1 | HRGMv2_2728_1_126 | 139066 | 140598 | + | 2.A.21.2.2 |
| TC | HRGMv2_2728_1 | HRGMv2_2728_1_127 | 140787 | 141473 | + | 2.A.115.2.14 |
Gene ID: HRGMv2_2728_1_121
Type: TC
Location: 132924 - 134315 (+)
Type: TC
Location: 132924 - 134315 (+)
Gene ID: HRGMv2_2728_1_122
Type: TC
Location: 134325 - 135827 (+)
Type: TC
Location: 134325 - 135827 (+)
Gene ID: HRGMv2_2728_1_123
Type: pfam
Location: 135879 - 136769 (-)
Type: pfam
Location: 135879 - 136769 (-)
Gene ID: HRGMv2_2728_1_124
Type: CAZyme
Location: 136782 - 137909 (-)
Type: CAZyme
Location: 136782 - 137909 (-)
Gene ID: HRGMv2_2728_1_125
Type: TF
Location: 138102 - 138950 (+)
Type: TF
Location: 138102 - 138950 (+)
Gene ID: HRGMv2_2728_1_126
Type: TC
Location: 139066 - 140598 (+)
Type: TC
Location: 139066 - 140598 (+)
Gene ID: HRGMv2_2728_1_127
Type: TC
Location: 140787 - 141473 (+)
Type: TC
Location: 140787 - 141473 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Butyricicoccus_A
Species
Butyricicoccus_A intestinisimiae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.