Cluster: HRGMv2_2726_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2726
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2726_20 | HRGMv2_2726_20_22 | 20234 | 22657 | - | GT35 |
| CAZyme | HRGMv2_2726_20 | HRGMv2_2726_20_23 | 22693 | 24102 | - | GT5 |
| pfam | HRGMv2_2726_20 | HRGMv2_2726_20_24 | 24448 | 25578 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_2726_20 | HRGMv2_2726_20_25 | 25575 | 26786 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_2726_20 | HRGMv2_2726_20_26 | 26783 | 28654 | - | CBM48 | GH13_9 |
| TC | HRGMv2_2726_20 | HRGMv2_2726_20_27 | 29122 | 30564 | + | 2.A.38.1.1 |
Gene ID: HRGMv2_2726_20_22
Type: CAZyme
Location: 20234 - 22657 (-)
Type: CAZyme
Location: 20234 - 22657 (-)
Gene ID: HRGMv2_2726_20_23
Type: CAZyme
Location: 22693 - 24102 (-)
Type: CAZyme
Location: 22693 - 24102 (-)
Gene ID: HRGMv2_2726_20_24
Type: pfam
Location: 24448 - 25578 (-)
Type: pfam
Location: 24448 - 25578 (-)
Gene ID: HRGMv2_2726_20_25
Type: pfam
Location: 25575 - 26786 (-)
Type: pfam
Location: 25575 - 26786 (-)
Gene ID: HRGMv2_2726_20_26
Type: CAZyme
Location: 26783 - 28654 (-)
Type: CAZyme
Location: 26783 - 28654 (-)
Gene ID: HRGMv2_2726_20_27
Type: TC
Location: 29122 - 30564 (+)
Type: TC
Location: 29122 - 30564 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900552475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.