Cluster: HRGMv2_2726_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2726
- CGC Family ID: CGCFAM_00032
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2726_12 | HRGMv2_2726_12_25 | 27376 | 28806 | + | 2.A.39.3.5 |
| TC | HRGMv2_2726_12 | HRGMv2_2726_12_26 | 29176 | 30495 | + | 9.B.18.1.3 |
| NULL(UNKNOWN) | HRGMv2_2726_12 | HRGMv2_2726_12_27 | 30492 | 31643 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2726_12 | HRGMv2_2726_12_28 | 31671 | 33149 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2726_12 | HRGMv2_2726_12_29 | 33146 | 34063 | + | GT2 |
Gene ID: HRGMv2_2726_12_25
Type: TC
Location: 27376 - 28806 (+)
Type: TC
Location: 27376 - 28806 (+)
Gene ID: HRGMv2_2726_12_26
Type: TC
Location: 29176 - 30495 (+)
Type: TC
Location: 29176 - 30495 (+)
Gene ID: HRGMv2_2726_12_27
Type:
Location: 30492 - 31643 (+)
Type:
Location: 30492 - 31643 (+)
Gene ID: HRGMv2_2726_12_28
Type:
Location: 31671 - 33149 (+)
Type:
Location: 31671 - 33149 (+)
Gene ID: HRGMv2_2726_12_29
Type: CAZyme
Location: 33146 - 34063 (+)
Type: CAZyme
Location: 33146 - 34063 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900552475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2726_12_25 | vegetarian > omnivore | 1.98003 | 0.01057 |