Cluster: HRGMv2_2726_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2726
- CGC Family ID: CGCFAM_03016
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2726_12 | HRGMv2_2726_12_7 | 9512 | 11218 | + | CBM50 |
| TF | HRGMv2_2726_12 | HRGMv2_2726_12_8 | 11502 | 11867 | + | GntR |
| TC | HRGMv2_2726_12 | HRGMv2_2726_12_9 | 11860 | 12762 | + | 3.A.1.126.1 |
Gene ID: HRGMv2_2726_12_7
Type: CAZyme
Location: 9512 - 11218 (+)
Type: CAZyme
Location: 9512 - 11218 (+)
Gene ID: HRGMv2_2726_12_8
Type: TF
Location: 11502 - 11867 (+)
Type: TF
Location: 11502 - 11867 (+)
Gene ID: HRGMv2_2726_12_9
Type: TC
Location: 11860 - 12762 (+)
Type: TC
Location: 11860 - 12762 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900552475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2726_12_7 | vegetarian > vegan | 1.42645 | 0.00364 |